Serialized Form

Package lerfob.carbonbalancetool
- Class lerfob.carbonbalancetool.AbstractDesigner extends java.lang.Object implements Serializable
 - Serialized Fields
 - workSpace
```
java.lang.String workSpace
```
 Deprecated.
 - managerName
```
java.lang.String managerName
```
 Deprecated.
- Class lerfob.carbonbalancetool.CATDecayFunction extends AbstractMathematicalFunction implements Serializable
- Class lerfob.carbonbalancetool.CATExponentialFunction extends CATDecayFunction implements Serializable
 
 serialVersionUID:
 
 20130128L
- Class lerfob.carbonbalancetool.CATFrame extends REpiceaFrame implements Serializable
 - Serialized Fields
 - caller
```
CarbonAccountingTool caller
```
 - graphicPanel
```
lerfob.carbonbalancetool.CATPanelView graphicPanel
```
 - hwpComboBox
```
REpiceaComboBoxOpenButton hwpComboBox
```
 - biomassComboBox
```
REpiceaComboBoxOpenButton biomassComboBox
```
 - file
```
javax.swing.JMenu file
```
 - view
```
javax.swing.JMenu view
```
 - options
```
javax.swing.JMenu options
```
 - sensitivityAnalysisMenuItem
```
javax.swing.JMenuItem sensitivityAnalysisMenuItem
```
 - calculateCarbonMenuItem
```
javax.swing.JMenuItem calculateCarbonMenuItem
```
 - stopMenuItem
```
javax.swing.JMenuItem stopMenuItem
```
 - close
```
javax.swing.JMenuItem close
```
 - help
```
javax.swing.JMenuItem help
```
 - importMenu
```
javax.swing.JMenu importMenu
```
 - yieldTable
```
javax.swing.JMenuItem yieldTable
```
 - growthSimulation
```
javax.swing.JMenuItem growthSimulation
```
 - calculateInCarbon
```
javax.swing.JRadioButtonMenuItem calculateInCarbon
```
 - calculateInCO2
```
javax.swing.JRadioButtonMenuItem calculateInCO2
```
 - confidenceIntervalSlider
```
REpiceaSlider confidenceIntervalSlider
```
 - aR2
```
javax.swing.JRadioButtonMenuItem aR2
```
 - aR4
```
javax.swing.JRadioButtonMenuItem aR4
```
 - aR5
```
javax.swing.JRadioButtonMenuItem aR5
```
 - calculateCarbonButton
```
javax.swing.JButton calculateCarbonButton
```
 - stopButton
```
javax.swing.JButton stopButton
```
 - majorProgressBar
```
javax.swing.JProgressBar majorProgressBar
```
 - majorProgressBarMessage
```
javax.swing.JLabel majorProgressBarMessage
```
 - minorProgressBar
```
javax.swing.JProgressBar minorProgressBar
```
 - minorProgressBarMessage
```
javax.swing.JLabel minorProgressBarMessage
```
 - vetoEnabled
```
boolean vetoEnabled
```
- Class lerfob.carbonbalancetool.CATOptionPanel extends javax.swing.JScrollPane implements Serializable
 - Serialized Fields
 - booleanSettings
```
java.util.List<E> booleanSettings
```
 - bySpeciesCheckBox
```
javax.swing.JCheckBox bySpeciesCheckBox
```
- Class lerfob.carbonbalancetool.CATPanelView.CarbonTabbedPane extends REpiceaTabbedPane implements Serializable
 - Serialized Fields
 - exportMenuItem
```
javax.swing.JMenuItem exportMenuItem
```
 - compareScenarioMenuItem
```
javax.swing.JMenuItem compareScenarioMenuItem
```
- Class lerfob.carbonbalancetool.CATScenarioComparisonDialog extends REpiceaDialog implements Serializable
 - Serialized Fields
 - panelView
```
lerfob.carbonbalancetool.CATPanelView panelView
```
 - alternativeScenarioComboBox
```
javax.swing.JComboBox<E> alternativeScenarioComboBox
```
 - baselineComboBox
```
javax.swing.JComboBox<E> baselineComboBox
```
 - comparisonModeComboBox
```
javax.swing.JComboBox<E> comparisonModeComboBox
```
 - dateBaselineScenarioComboBox
```
javax.swing.JComboBox<E> dateBaselineScenarioComboBox
```
 - dateAlternativeScenarioComboBox
```
javax.swing.JComboBox<E> dateAlternativeScenarioComboBox
```
 - ok
```
javax.swing.JButton ok
```
 - cancel
```
javax.swing.JButton cancel
```
 - help
```
javax.swing.JButton help
```
 - selectionCompared
```
java.lang.String selectionCompared
```
 - baselinePanel
```
lerfob.carbonbalancetool.CATSingleViewPanel baselinePanel
```
- Class lerfob.carbonbalancetool.CATTask extends AbstractGenericTask implements Serializable
 - Serialized Fields
 - currentTask
```
CATTask.Task currentTask
```
 - caller
```
CarbonAccountingTool caller
```
- Class lerfob.carbonbalancetool.CATTask.SetProperRealizationTask extends CATTask implements Serializable
 - Serialized Fields
 - realizationID
```
int realizationID
```
- Class lerfob.carbonbalancetool.CATTimeTable extends java.util.ArrayList<java.lang.Integer> implements Serializable
 - Serialized Fields
 - lastStandDate
```
int lastStandDate
```
 - initialAgeYr
```
int initialAgeYr
```
- Class lerfob.carbonbalancetool.CATUtility.CarbonToolSettingsVector extends java.util.Vector<E extends CATUtility.ParameterWrapper<?>> implements Serializable
- Class lerfob.carbonbalancetool.CATUtilityMaps.CATSpeciesAmountMap extends java.util.HashMap<java.lang.String,AmountMap<CarbonUnit.Element>> implements Serializable
 - Serialized Fields
 - speciesList
```
java.util.List<E> speciesList
```
- Class lerfob.carbonbalancetool.CATUtilityMaps.CATUseClassSpeciesAmountMap extends java.util.HashMap<EndUseWoodProductCarbonUnitFeature.UseClass,CATUtilityMaps.CATSpeciesAmountMap> implements Serializable
 - Serialized Fields
 - speciesList
```
java.util.List<E> speciesList
```
- Class lerfob.carbonbalancetool.CATUtilityMaps.MonteCarloEstimateMap extends java.util.TreeMap<CarbonUnit.Element,MonteCarloEstimate> implements Serializable
- Class lerfob.carbonbalancetool.CATUtilityMaps.SpeciesMonteCarloEstimateMap extends java.util.TreeMap<java.lang.String,CATUtilityMaps.MonteCarloEstimateMap> implements Serializable
- Class lerfob.carbonbalancetool.CATUtilityMaps.UseClassSpeciesMonteCarloEstimateMap extends java.util.TreeMap<EndUseWoodProductCarbonUnitFeature.UseClass,CATUtilityMaps.SpeciesMonteCarloEstimateMap> implements Serializable

Package lerfob.carbonbalancetool.biomassparameters

Class lerfob.carbonbalancetool.biomassparameters.BiomassParametersDialog extends REpiceaDialog implements Serializable

serialVersionUID:: 20130828L

Serialized Fields

reset
```
javax.swing.JMenuItem reset
```
load
```
javax.swing.JMenuItem load
```
save
```
javax.swing.JMenuItem save
```
saveAs
```
javax.swing.JMenuItem saveAs
```
close
```
javax.swing.JMenuItem close
```
help
```
javax.swing.JMenuItem help
```
woodDensityLabel
```
javax.swing.JLabel woodDensityLabel
```

branchExpansionFactorConiferous

NumberFormatFieldFactory.JFormattedNumericField branchExpansionFactorConiferous

branchExpansionFactorBroadleaved

NumberFormatFieldFactory.JFormattedNumericField branchExpansionFactorBroadleaved

rootExpansionFactorConiferous

NumberFormatFieldFactory.JFormattedNumericField rootExpansionFactorConiferous

rootExpansionFactorBroadleaved

NumberFormatFieldFactory.JFormattedNumericField rootExpansionFactorBroadleaved

carbonContentConiferous

NumberFormatFieldFactory.JFormattedNumericField carbonContentConiferous

carbonContentBroadleaved

NumberFormatFieldFactory.JFormattedNumericField carbonContentBroadleaved

branchFromModelChkBox

javax.swing.JCheckBox branchFromModelChkBox

rootFromModelChkBox

javax.swing.JCheckBox rootFromModelChkBox

basicDensityFromModelChkBox

javax.swing.JCheckBox basicDensityFromModelChkBox

carbonContentFromModelChkBox

javax.swing.JCheckBox carbonContentFromModelChkBox

caller
```
BiomassParameters caller
```
windowSettings
```
WindowSettings windowSettings
```

Package lerfob.carbonbalancetool.catdiameterbasedtreelogger
- Class lerfob.carbonbalancetool.catdiameterbasedtreelogger.CATDiameterBasedTreeLogCategory extends DiameterBasedTreeLogCategory implements Serializable
- Class lerfob.carbonbalancetool.catdiameterbasedtreelogger.CATDiameterBasedTreeLogCategoryPanel extends DiameterBasedTreeLogCategoryPanel implements Serializable
- Class lerfob.carbonbalancetool.catdiameterbasedtreelogger.CATDiameterBasedTreeLoggerParameters extends DiameterBasedTreeLoggerParameters implements Serializable
- Class lerfob.carbonbalancetool.catdiameterbasedtreelogger.CATDiameterBasedTreeLoggerParametersDialog extends DiameterBasedTreeLoggerParametersDialog implements Serializable
Package lerfob.carbonbalancetool.gui
- Class lerfob.carbonbalancetool.gui.EnhancedStatisticalBarRenderer extends org.jfree.chart.renderer.category.StatisticalBarRenderer implements Serializable
- Class lerfob.carbonbalancetool.gui.XYSeriesWithIntegratedRenderer extends org.jfree.data.xy.XYSeries implements Serializable
  - Serialized Fields
    - isMean
```
boolean isMean
```
    - carbonFactor
```
double carbonFactor
```
    - compartmentInfo
```
CATCompartment.CompartmentInfo compartmentInfo
```
    - dataset
```
org.jfree.data.xy.XYSeriesCollection dataset
```
Package lerfob.carbonbalancetool.io
- Class lerfob.carbonbalancetool.io.CATGrowthSimulationRecordReader extends REpiceaRecordReader implements Serializable
 - Serialized Fields
 - standMap
```
java.util.Map<K,V> standMap
```
 - selector
```
CATGrowthSimulationSpeciesSelector selector
```
 - speciesList
```
java.util.List<E> speciesList
```
- Class lerfob.carbonbalancetool.io.CATGrowthSimulationSpeciesSelector.CATGrowthSimulationSpeciesSelectorDialog extends REpiceaMatchSelectorDialog implements Serializable
- Class lerfob.carbonbalancetool.io.CATSpeciesSelectionDialog extends REpiceaDialog implements Serializable
 - Serialized Fields
 - speciesComboBox
```
javax.swing.JComboBox<E> speciesComboBox
```
 - okButton
```
javax.swing.JButton okButton
```
 - isValidated
```
boolean isValidated
```
- Class lerfob.carbonbalancetool.io.CATYieldTableRecordReader extends REpiceaRecordReader implements Serializable
 - Serialized Fields
 - standList
```
java.util.List<E> standList
```
 - catSpecies
```
CATSettings.CATSpecies catSpecies
```
Package lerfob.carbonbalancetool.productionlines
- Class lerfob.carbonbalancetool.productionlines.AbstractProcessor extends Processor implements Serializable
 - Serialized Fields
 - functionUnitBiomass
```
double functionUnitBiomass
```
 - emissionsByFunctionalUnit
```
double emissionsByFunctionalUnit
```
- Class lerfob.carbonbalancetool.productionlines.AbstractProcessorButton extends ProcessorButton implements Serializable
- Class lerfob.carbonbalancetool.productionlines.AbstractProductionLineProcessor extends AbstractProcessor implements Serializable
 - Serialized Fields
 - woodProductFeature
```
CarbonUnitFeature woodProductFeature
```
- Class lerfob.carbonbalancetool.productionlines.CarbonUnitFeature extends java.lang.Object implements Serializable
 
 serialVersionUID:
 
 20101118L
 - Serialized Fields
 - averageLifetime
```
double averageLifetime
```
 IMPORTANT: This field can be either the average lifetime or the half-life. The conversion is handled by the getAverageLifetime() method.
 - processor
```
AbstractProductionLineProcessor processor
```
 - lifetimeMode
```
CarbonUnitFeature.LifetimeMode lifetimeMode
```
- Class lerfob.carbonbalancetool.productionlines.CarbonUnitFeaturePanel extends REpiceaPanel implements Serializable
 
 serialVersionUID:
 
 20101020L
 - Serialized Fields
 - lifetimeModeList
```
javax.swing.JComboBox<E> lifetimeModeList
```
 - averageLifetimeTextField
```
NumberFormatFieldFactory.JFormattedNumericField averageLifetimeTextField
```
 - caller
```
CarbonUnitFeature caller
```
 - mainPanel
```
javax.swing.JPanel mainPanel
```
- Class lerfob.carbonbalancetool.productionlines.CarbonUnitList extends java.util.ArrayList<CarbonUnit> implements Serializable
 
 serialVersionUID:
 
 20110413L
- Class lerfob.carbonbalancetool.productionlines.CarbonUnitMap extends java.util.HashMap<T extends java.lang.Enum<?>,CarbonUnitList> implements Serializable
- Class lerfob.carbonbalancetool.productionlines.EndOfLifeLinkLine extends ValidProcessorLinkLine implements Serializable
- Class lerfob.carbonbalancetool.productionlines.EndUseWoodProductCarbonUnitFeature extends CarbonUnitFeature implements Serializable
 
 serialVersionUID:
 
 20101020L
 - Serialized Fields
 - disposable
```
boolean disposable
```
 Deprecated.
 - disposableProportion
```
double disposableProportion
```
 Deprecated.
 - useClass
```
EndUseWoodProductCarbonUnitFeature.UseClass useClass
```
 - combustionProcess
```
CombustionEmissions.CombustionProcess combustionProcess
```
 - averageSubstitution
```
double averageSubstitution
```
 Deprecated.
 
 The average C to m3 of raw material substitution ratio.
 - relativeSubstitutionCO2EqFonctionalUnit
```
double relativeSubstitutionCO2EqFonctionalUnit
```
 - biomassOfFunctionalUnit
```
double biomassOfFunctionalUnit
```
 - emissionsByFunctionalUnit
```
double emissionsByFunctionalUnit
```
 - lca
```
LifeCycleAnalysis lca
```
 Deprecated.
- Class lerfob.carbonbalancetool.productionlines.EndUseWoodProductCarbonUnitFeaturePanel extends CarbonUnitFeaturePanel implements Serializable
 
 serialVersionUID:
 
 20101020L
 - Serialized Fields
 - useClassList
```
javax.swing.JComboBox<E> useClassList
```
 - combustionProcessList
```
javax.swing.JComboBox<E> combustionProcessList
```
 - substitutionTextField
```
NumberFormatFieldFactory.JFormattedNumericField substitutionTextField
```
 - isDisposableCheckBox
```
javax.swing.JCheckBox isDisposableCheckBox
```
 - disposableProportionLabel
```
javax.swing.JLabel disposableProportionLabel
```
 - disposableProportionSlider
```
javax.swing.JSlider disposableProportionSlider
```
 - biomassFUTextField
```
NumberFormatFieldFactory.JFormattedNumericField biomassFUTextField
```
 - emissionsByFUField
```
NumberFormatFieldFactory.JFormattedNumericField emissionsByFUField
```
- Class lerfob.carbonbalancetool.productionlines.EnhancedProcessorInternalDialog extends ProcessorInternalDialog implements Serializable
 - Serialized Fields
 - functionUnitBiomass
```
NumberFormatFieldFactory.JFormattedNumericField functionUnitBiomass
```
 - emissionsByFunctionUnit
```
NumberFormatFieldFactory.JFormattedNumericField emissionsByFunctionUnit
```
- Class lerfob.carbonbalancetool.productionlines.ExtendedSystemPanel extends SystemPanel implements Serializable
- Class lerfob.carbonbalancetool.productionlines.LandfillCarbonUnitFeature extends CarbonUnitFeature implements Serializable
 
 serialVersionUID:
 
 20101118L
 - Serialized Fields
 - degradableOrganicCarbonFraction
```
double degradableOrganicCarbonFraction
```
 - landfillType
```
LandfillCarbonUnitFeature.LandfillType landfillType
```
- Class lerfob.carbonbalancetool.productionlines.LandfillCarbonUnitFeaturePanel extends CarbonUnitFeaturePanel implements Serializable
 
 serialVersionUID:
 
 20101118L
 - Serialized Fields
 - degradableOrganicCarbonFractionLabel
```
javax.swing.JLabel degradableOrganicCarbonFractionLabel
```
 - degradableOrganicCarbonFractionSlider
```
javax.swing.JSlider degradableOrganicCarbonFractionSlider
```
 - landfillTypeLabel
```
javax.swing.JLabel landfillTypeLabel
```
 - landFillTypeComboBox
```
javax.swing.JComboBox<E> landFillTypeComboBox
```
- Class lerfob.carbonbalancetool.productionlines.LandfillProcessor extends AbstractProductionLineProcessor implements Serializable
- Class lerfob.carbonbalancetool.productionlines.LandfillProcessor.LandfillProcessorButton extends ProductionLineProcessorButton implements Serializable
- Class lerfob.carbonbalancetool.productionlines.LeftHandSideProcessor extends AbstractProcessor implements Serializable
- Class lerfob.carbonbalancetool.productionlines.LeftHandSideProcessor.LeftHandSideProcessorButton extends AbstractProcessorButton implements Serializable
- Class lerfob.carbonbalancetool.productionlines.LeftInForestProcessor extends AbstractProductionLineProcessor implements Serializable
- Class lerfob.carbonbalancetool.productionlines.LeftInForestProcessor.LeftInForestProcessorButton extends ProductionLineProcessorButton implements Serializable
- Class lerfob.carbonbalancetool.productionlines.LifeCycleAnalysis extends java.lang.Object implements Serializable
 
 serialVersionUID:
 
 20100914L
 - Serialized Fields
 - strActivity
```
java.lang.String strActivity
```
 Deprecated.
 - dCO2EmissionPerUnit
```
double dCO2EmissionPerUnit
```
 Deprecated.
 - dCH4EmissionPerUnit
```
double dCH4EmissionPerUnit
```
 Deprecated.
 - dN2OEmissionPerUnit
```
double dN2OEmissionPerUnit
```
 Deprecated.
- Class lerfob.carbonbalancetool.productionlines.LogCategoryProcessor extends LeftHandSideProcessor implements Serializable
 - Serialized Fields
 - logCategory
```
LogCategory logCategory
```
- Class lerfob.carbonbalancetool.productionlines.LogCategoryProcessor.LogCategoryProcessorButton extends LeftHandSideProcessor.LeftHandSideProcessorButton implements Serializable
- Class lerfob.carbonbalancetool.productionlines.PreEndOfLifeLinkLine extends PreProcessorLinkLine implements Serializable
- Class lerfob.carbonbalancetool.productionlines.ProductionLine extends java.lang.Object implements Serializable
 
 serialVersionUID:
 
 20101018L
 - Serialized Fields
 - primaryProcessor
```
ProductionLineProcessor primaryProcessor
```
 Deprecated.
 - marketName
```
java.lang.String marketName
```
 Deprecated.
 - landfillSite
```
boolean landfillSite
```
 Deprecated.
 - leftInForest
```
boolean leftInForest
```
 Deprecated.
- Class lerfob.carbonbalancetool.productionlines.ProductionLineEvent extends java.util.EventObject implements Serializable
- Class lerfob.carbonbalancetool.productionlines.ProductionLineManager extends AbstractDesigner<ProductionLine> implements Serializable
 
 serialVersionUID:
 
 20130127L
 - Serialized Fields
 - marketModels
```
java.util.List<E> marketModels
```
 Deprecated.
 - landfillModel
```
ProductionLine landfillModel
```
 Deprecated.
 - leftInTheForestModel
```
ProductionLine leftInTheForestModel
```
 Deprecated.
- Class lerfob.carbonbalancetool.productionlines.ProductionLineProcessor extends AbstractProductionLineProcessor implements Serializable
 
 serialVersionUID:
 
 20101018L
 - Serialized Fields
 - averageYield
```
double averageYield
```
 Deprecated.
 - sentToAnotherMarket
```
boolean sentToAnotherMarket
```
 Deprecated.
 - selectedMarketToBeSentTo
```
int selectedMarketToBeSentTo
```
 Deprecated.
 - selectedMarketToBeSentToStr
```
java.lang.String selectedMarketToBeSentToStr
```
 Deprecated.
 - fatherProcessor
```
ProductionLineProcessor fatherProcessor
```
 - disposedToProcessor
```
Processor disposedToProcessor
```
 - market
```
ProductionLine market
```
 Deprecated.
- Class lerfob.carbonbalancetool.productionlines.ProductionLineProcessorButton extends AbstractProcessorButton implements Serializable
 - Serialized Fields
 - createEndOfLifeLinkRecognizer
```
java.awt.dnd.DragGestureRecognizer createEndOfLifeLinkRecognizer
```
- Class lerfob.carbonbalancetool.productionlines.ProductionProcessorManager.TreeLoggerInstanceCompatibilityException extends java.security.InvalidParameterException implements Serializable
- Class lerfob.carbonbalancetool.productionlines.ProductionProcessorManagerDialog extends SystemManagerDialog implements Serializable
 - Serialized Fields
 - comboBoxPanel
```
REpiceaComboBoxOpenButton comboBoxPanel
```
 - treeLoggerComboBox
```
javax.swing.JComboBox<E> treeLoggerComboBox
```
 - downloadExamplesMenuItem
```
javax.swing.JMenuItem downloadExamplesMenuItem
```
- Class lerfob.carbonbalancetool.productionlines.ProductionProcessorToolPanel extends ToolPanel implements Serializable
 - Serialized Fields
 - createProductionLineProcessorButton
```
DnDCompatibleButton createProductionLineProcessorButton
```
 - createLeftInForestButton
```
DnDCompatibleButton createLeftInForestButton
```
 - createLandfillProcessorButton
```
DnDCompatibleButton createLandfillProcessorButton
```
 - createEndOfLifeLinkButton
```
ToolButton createEndOfLifeLinkButton
```
- Class lerfob.carbonbalancetool.productionlines.ProductionProcessorToolPanel.CreateEndOfLifeLinkButton extends ToolButton implements Serializable
- Class lerfob.carbonbalancetool.productionlines.ProductionProcessorToolPanel.CreateLandfillProcessorButton extends DnDCompatibleButton implements Serializable
- Class lerfob.carbonbalancetool.productionlines.ProductionProcessorToolPanel.CreateLeftInForestProcessorButton extends DnDCompatibleButton implements Serializable
- Class lerfob.carbonbalancetool.productionlines.ProductionProcessorToolPanel.CreateProductionLineProcessorButton extends DnDCompatibleButton implements Serializable
- Class lerfob.carbonbalancetool.productionlines.WoodyDebrisProcessor extends LeftHandSideProcessor implements Serializable
 - Serialized Fields
 - wdpID
```
WoodyDebrisProcessor.WoodyDebrisProcessorID wdpID
```
- Class lerfob.carbonbalancetool.productionlines.WoodyDebrisProcessor.WoodyDebrisProcessorButton extends LeftHandSideProcessor.LeftHandSideProcessorButton implements Serializable
Package lerfob.carbonbalancetool.sensitivityanalysis
- Class lerfob.carbonbalancetool.sensitivityanalysis.CATGaussianSensitivityAnalysisParameter extends CATSensitivityAnalysisParameter<GaussianEstimate> implements Serializable
- Class lerfob.carbonbalancetool.sensitivityanalysis.CATSensitivityAnalysisParameter extends SensitivityAnalysisParameter<E extends Estimate> implements Serializable
 - Serialized Fields
 - multiplier
```
double multiplier
```
- Class lerfob.carbonbalancetool.sensitivityanalysis.CATSensitivityAnalysisSettingsDlg extends REpiceaDialog implements Serializable
 - Serialized Fields
 - caller
```
CATSensitivityAnalysisSettings caller
```
 - mcRealField
```
NumberFormatFieldFactory.JFormattedNumericField mcRealField
```
- Class lerfob.carbonbalancetool.sensitivityanalysis.CATUniformSensitivityAnalysisParameter extends CATSensitivityAnalysisParameter<UniformEstimate> implements Serializable
Package lerfob.carbonbalancetool.woodpiecedispatcher
- Class lerfob.carbonbalancetool.woodpiecedispatcher.LogCategoryDispatcher extends java.lang.Object implements Serializable
 
 serialVersionUID:
 
 20101020L
 - Serialized Fields
 - name
```
java.lang.String name
```
 Deprecated.
 - matches
```
java.util.ArrayList<E> matches
```
 Deprecated.
- Class lerfob.carbonbalancetool.woodpiecedispatcher.LogCategoryToMarketMatch extends java.lang.Object implements Serializable
 
 serialVersionUID:
 
 20101020L
 - Serialized Fields
 - proportion
```
double proportion
```
 Deprecated.
 - marketName
```
java.lang.String marketName
```
 Deprecated.
 - dispatcher
```
LogCategoryDispatcher dispatcher
```
 Deprecated.
- Class lerfob.carbonbalancetool.woodpiecedispatcher.WoodPieceDispatcher extends AbstractDesigner<LogCategoryDispatcher> implements Serializable
 
 serialVersionUID:
 
 20130127L
 - Serialized Fields
 - marketNames
```
java.util.Vector<E> marketNames
```
 Deprecated.
 - referenceLogCategoryNames
```
java.util.List<E> referenceLogCategoryNames
```
 Deprecated.
 - logCategoryNames
```
java.util.List<E> logCategoryNames
```
 Deprecated.
 - dispatchers
```
java.util.List<E> dispatchers
```
 Deprecated.
Package lerfob.predictor.dopalep
- Class lerfob.predictor.dopalep.DopalepDbhIncrementPredictor extends REpiceaPredictor implements Serializable
Package lerfob.predictor.hdrelationships.frenchgeneralhdrelationship2014
- Class lerfob.predictor.hdrelationships.frenchgeneralhdrelationship2014.FrenchHDRelationship2014InternalPredictor extends HDRelationshipPredictor<FrenchHDRelationship2014Stand,FrenchHDRelationship2014Tree> implements Serializable
 - Serialized Fields
 - effectList
```
java.util.List<E> effectList
```
 - species
```
FrenchHDRelationshipTree.FrenchHdSpecies species
```
 - currentFertilityClass
```
FertilityClassEmulator.FertilityClass currentFertilityClass
```
- Class lerfob.predictor.hdrelationships.frenchgeneralhdrelationship2014.FrenchHDRelationship2014Predictor extends REpiceaPredictor implements Serializable
 
 serialVersionUID:
 
 -8769528746292724237L
 - Serialized Fields
 - predictorMap
```
java.util.Map<K,V> predictorMap
```
Package lerfob.predictor.hdrelationships.frenchgeneralhdrelationship2018
- Class lerfob.predictor.hdrelationships.frenchgeneralhdrelationship2018.FrenchHDRelationship2018ClimateGenerator extends java.lang.Object implements Serializable
 - Serialized Fields
 - zoneMap
```
java.util.Map<K,V> zoneMap
```
- Class lerfob.predictor.hdrelationships.frenchgeneralhdrelationship2018.FrenchHDRelationship2018InternalPredictor extends HDRelationshipPredictor<FrenchHDRelationship2018Plot,FrenchHDRelationship2018Tree> implements Serializable
 - Serialized Fields
 - effectList
```
java.util.List<E> effectList
```
 - species
```
FrenchHDRelationshipTree.FrenchHdSpecies species
```
 - currentFertilityClass
```
FertilityClassEmulator.FertilityClass currentFertilityClass
```
 - mainPredictor
```
FrenchHDRelationship2018Predictor mainPredictor
```
- Class lerfob.predictor.hdrelationships.frenchgeneralhdrelationship2018.FrenchHDRelationship2018Predictor extends REpiceaPredictor implements Serializable
 
 serialVersionUID:
 
 -8769528746292724237L
 - Serialized Fields
 - predictorMap
```
java.util.Map<K,V> predictorMap
```
 - originalClimateVariableMap
```
java.util.Map<K,V> originalClimateVariableMap
```
 - climateGenerator
```
FrenchHDRelationship2018ClimateGenerator climateGenerator
```
 - climateChangeGenerator
```
REpiceaClimateChangeGenerator climateChangeGenerator
```
 - climateTrendMap
```
java.util.Map<K,V> climateTrendMap
```
Package lerfob.predictor.mathilde
- Class lerfob.predictor.mathilde.MathildeSubModule extends REpiceaPredictor implements Serializable
  - Serialized Fields
    - errorTotalVariance
```
double errorTotalVariance
```
Package lerfob.predictor.mathilde.climate
- Class lerfob.predictor.mathilde.climate.MathildeClimatePredictor extends REpiceaPredictor implements Serializable
 - Serialized Fields
 - listStandID
```
java.util.List<E> listStandID
```
 - rho
```
double rho
```
 - blups
```
GaussianEstimate blups
```
 - rcp
```
REpiceaClimateGenerator.RepresentativeConcentrationPathway rcp
```
Package lerfob.predictor.mathilde.climate.formerversion
- Class lerfob.predictor.mathilde.climate.formerversion.MathildeClimatePredictor extends REpiceaPredictor implements Serializable
 - Serialized Fields
 - listStandID
```
java.util.List<E> listStandID
```
 Deprecated.
 - rho
```
double rho
```
 Deprecated.
 - blups
```
GaussianEstimate blups
```
 Deprecated.
Package lerfob.predictor.mathilde.diameterincrement
- Class lerfob.predictor.mathilde.diameterincrement.MathildeDiameterIncrementPredictor extends REpiceaPredictor implements Serializable
 
 serialVersionUID:
 
 20130627L
 - Serialized Fields
 - subModules
```
java.util.Map<K,V> subModules
```
Package lerfob.predictor.mathilde.mortality
- Class lerfob.predictor.mathilde.mortality.MathildeImprovedMortalityPredictor extends MathildeMortalityPredictor implements Serializable
- Class lerfob.predictor.mathilde.mortality.MathildeMortalityPredictor extends REpiceaBinaryEventPredictor<MathildeMortalityStand,MathildeTree> implements Serializable
 - Serialized Fields
 - subModules
```
java.util.Map<K,V> subModules
```
 - linkFunction
```
LinkFunction linkFunction
```
 - numberOfParameters
```
int numberOfParameters
```
 - ghq
```
GaussHermiteQuadrature ghq
```
- Class lerfob.predictor.mathilde.mortality.MathildeMortalityPredictor.InternalMathematicalFunction extends AbstractMathematicalFunction implements Serializable
Package lerfob.predictor.mathilde.recruitment
- Class lerfob.predictor.mathilde.recruitment.MathildeRecruitDbhPredictor extends REpiceaPredictor implements Serializable
- Class lerfob.predictor.mathilde.recruitment.MathildeRecruitmentNumberPredictor extends REpiceaPredictor implements Serializable
  - Serialized Fields
    - oXVectorZero
```
Matrix oXVectorZero
```
    - copula
```
GaussianEstimate copula
```
Package lerfob.predictor.mathilde.thinning
- Class lerfob.predictor.mathilde.thinning.MathildeStandThinningPredictor extends REpiceaBinaryEventPredictor<MathildeThinningStand,java.lang.Object> implements Serializable
 - Serialized Fields
 - subModules
```
java.util.Map<K,V> subModules
```
 - linkFunction
```
LinkFunction linkFunction
```
- Class lerfob.predictor.mathilde.thinning.MathildeTreeThinningPredictor extends REpiceaBinaryEventPredictor<MathildeThinningStand,MathildeTree> implements Serializable
 - Serialized Fields
 - subModules
```
java.util.Map<K,V> subModules
```
 - linkFunction
```
LinkFunction linkFunction
```
 - numberOfParameters
```
int numberOfParameters
```
 - ghq
```
GaussHermiteQuadrature ghq
```
Package lerfob.predictor.mathilde.thinningbeta
- Class lerfob.predictor.mathilde.thinningbeta.MathildeStandThinningPredictor extends REpiceaBinaryEventPredictor<MathildeThinningStand,java.lang.Object> implements Serializable
 - Serialized Fields
 - subModules
```
java.util.Map<K,V> subModules
```
 Deprecated.
 - linkFunction
```
LinkFunction linkFunction
```
 Deprecated.
 - numberOfParameters
```
int numberOfParameters
```
 Deprecated.
- Class lerfob.predictor.mathilde.thinningbeta.MathildeTreeThinningPredictor extends REpiceaBinaryEventPredictor<MathildeThinningStand,MathildeTree> implements Serializable
 - Serialized Fields
 - subModules
```
java.util.Map<K,V> subModules
```
 Deprecated.
 - linkFunction
```
LinkFunction linkFunction
```
 Deprecated.
 - numberOfParameters
```
int numberOfParameters
```
 Deprecated.
 - ghq
```
GaussHermiteQuadrature ghq
```
 Deprecated.
Package lerfob.predictor.thinners.frenchnfithinner2018
- Class lerfob.predictor.thinners.frenchnfithinner2018.FrenchNFIThinnerPredictor extends REpiceaBinaryEventPredictor<FrenchNFIThinnerPlot,java.lang.Object> implements Serializable
 - Serialized Fields
 - NumberParmsForHazard
```
int NumberParmsForHazard
```
 - priceProvider
```
lerfob.predictor.thinners.frenchnfithinner2018.FrenchNFIThinnerStandingPriceProvider priceProvider
```
Package lerfob.predictor.volume.frenchcommercialvolume2014
- Class lerfob.predictor.volume.frenchcommercialvolume2014.FrenchCommercialVolume2014Predictor extends REpiceaPredictor implements Serializable
Package lerfob.predictor.volume.frenchcommercialvolume2020
- Class lerfob.predictor.volume.frenchcommercialvolume2020.FrenchCommercialVolume2020Predictor extends REpiceaPredictor implements Serializable
 - Serialized Fields
 - internalPredictorMap
```
java.util.Map<K,V> internalPredictorMap
```
Package lerfob.treelogger.basictreelogger
- Class lerfob.treelogger.basictreelogger.BasicLogCategory extends LogCategory implements Serializable
 - Serialized Fields
 - volumeProportionToBeProcessedInThisCategory
```
double volumeProportionToBeProcessedInThisCategory
```
- Class lerfob.treelogger.basictreelogger.BasicTreeLoggerParameters extends TreeLoggerParameters<BasicLogCategory> implements Serializable
- Class lerfob.treelogger.basictreelogger.BasicTreeLoggerParametersDialog extends TreeLoggerParametersDialog<BasicLogCategory> implements Serializable
 - Serialized Fields
 - shortLivedSlider
```
REpiceaSlider shortLivedSlider
```
 - longLivedSlider
```
REpiceaSlider longLivedSlider
```
- Class lerfob.treelogger.basictreelogger.BasicTreeLoggerWoodPiece extends WoodPiece implements Serializable
Package lerfob.treelogger.diameterbasedtreelogger
- Class lerfob.treelogger.diameterbasedtreelogger.DiameterBasedTreeLogCategory extends LogCategory implements Serializable
 - Serialized Fields
 - isChangeAllowed
```
boolean isChangeAllowed
```
 - minimumDbhCm
```
double minimumDbhCm
```
 - conversionFactor
```
double conversionFactor
```
 - downgradingProportion
```
double downgradingProportion
```
 - isConversionEnabled
```
boolean isConversionEnabled
```
 - isDowngradingEnabled
```
boolean isDowngradingEnabled
```
 - subCategory
```
DiameterBasedTreeLogCategory subCategory
```
 - logGrade
```
java.lang.Enum<E extends java.lang.Enum<E>> logGrade
```
- Class lerfob.treelogger.diameterbasedtreelogger.DiameterBasedTreeLogCategoryPanel extends LogCategoryPanel<DiameterBasedTreeLogCategory> implements Serializable
 - Serialized Fields
 - minimumDiameterField
```
NumberFormatFieldFactory.JFormattedNumericField minimumDiameterField
```
 - downgradingProportionSlider
```
REpiceaSlider downgradingProportionSlider
```
 - potentialSlider
```
REpiceaSlider potentialSlider
```
- Class lerfob.treelogger.diameterbasedtreelogger.DiameterBasedTreeLoggerParameters extends TreeLoggerParameters<DiameterBasedTreeLogCategory> implements Serializable
- Class lerfob.treelogger.diameterbasedtreelogger.DiameterBasedTreeLoggerParametersDialog extends TreeLoggerParametersDialog<DiameterBasedTreeLogCategory> implements Serializable
- Class lerfob.treelogger.diameterbasedtreelogger.DiameterBasedWoodPiece extends WoodPiece implements Serializable
Package lerfob.treelogger.douglasfirfcba
- Class lerfob.treelogger.douglasfirfcba.DouglasFCBATreeLoggerParameters extends TreeLoggerParameters<lerfob.treelogger.douglasfirfcba.DouglasFCBALogCategory> implements Serializable
Package lerfob.treelogger.europeanbeech
- Class lerfob.treelogger.europeanbeech.EuropeanBeechBasicTreeLogCategory extends DiameterBasedTreeLogCategory implements Serializable
- Class lerfob.treelogger.europeanbeech.EuropeanBeechBasicTreeLoggerParameters extends DiameterBasedTreeLoggerParameters implements Serializable
Package lerfob.treelogger.maritimepine
- Class lerfob.treelogger.maritimepine.MaritimePineBasicTreeLogCategory extends DiameterBasedTreeLogCategory implements Serializable
- Class lerfob.treelogger.maritimepine.MaritimePineBasicTreeLoggerParameters extends DiameterBasedTreeLoggerParameters implements Serializable
Package lerfob.treelogger.mathilde
- Class lerfob.treelogger.mathilde.MathildeTreeLoggerParameters extends TreeLoggerParameters<lerfob.treelogger.mathilde.MathildeTreeLogCategory> implements Serializable
Package lerfob.windstormdamagemodels.awsmodel
- Class lerfob.windstormdamagemodels.awsmodel.AlbrechtWindStormModelUI extends javax.swing.JDialog implements Serializable
  - Serialized Fields
    - stochasticOptionCheckBox
```
javax.swing.JCheckBox stochasticOptionCheckBox
```
    - ok
```
javax.swing.JButton ok
```
Package repicea.app
- Class repicea.app.AbstractGenericTask extends javax.swing.SwingWorker<java.lang.Boolean,java.lang.Object> implements Serializable
 
 serialVersionUID:
 
 20111219L
 - Serialized Fields
 - correctlyTerminated
```
boolean correctlyTerminated
```
 - failureReason
```
java.lang.Exception failureReason
```
 - name
```
java.lang.String name
```
 - isOver
```
boolean isOver
```
 - lock
```
java.lang.Object lock
```
 - isCancelled
```
boolean isCancelled
```
 Member isCancelled should be used in the doThisJob() method to ensure a proper cancellation.

Package repicea.console

Class repicea.console.MainDialog extends REpiceaFrame implements Serializable

Serialized Fields

scrollPane
```
javax.swing.JScrollPane scrollPane
```
caller
```
Trigger caller
```
applicationMenu
```
javax.swing.JMenu applicationMenu
```
languageMenu
```
javax.swing.JMenu languageMenu
```
encodingMenu
```
javax.swing.JMenu encodingMenu
```
memorySizeMenu
```
javax.swing.JMenu memorySizeMenu
```
currentMemoryMenu
```
javax.swing.JMenu currentMemoryMenu
```
mntmStart
```
javax.swing.JMenuItem mntmStart
```
mntmStop
```
javax.swing.JMenuItem mntmStop
```
mntmQuit
```
javax.swing.JMenuItem mntmQuit
```
mntmHelp
```
javax.swing.JMenuItem mntmHelp
```
javaProcessWrapper
```
JavaProcessWrapper javaProcessWrapper
```
logger
```
Logger logger
```

languageFr

repicea.console.MainDialog.LanguageRadioButtonMenuItem languageFr

languageEn

repicea.console.MainDialog.LanguageRadioButtonMenuItem languageEn

utf8Encoding

repicea.console.MainDialog.EncodingRadioButtonMenuItem utf8Encoding

asciiEncoding

repicea.console.MainDialog.EncodingRadioButtonMenuItem asciiEncoding

iso8859Encoding

repicea.console.MainDialog.EncodingRadioButtonMenuItem iso8859Encoding

slider
```
javax.swing.JSlider slider
```

Package repicea.gui
- Class repicea.gui.REpiceaDialog extends javax.swing.JDialog implements Serializable
  - Serialized Fields
    - iconImage
```
java.awt.Image iconImage
```
    - cancelOnClose
```
boolean cancelOnClose
```
    - askUserBeforeExit
```
boolean askUserBeforeExit
```
- Class repicea.gui.REpiceaFrame extends javax.swing.JFrame implements Serializable
  - Serialized Fields
    - iconImage
```
java.awt.Image iconImage
```
    - owner
```
java.awt.Window owner
```
    - location
```
java.awt.Point location
```
    - cancelOnClose
```
boolean cancelOnClose
```
    - askUserBeforeExit
```
boolean askUserBeforeExit
```
- Class repicea.gui.REpiceaLookAndFeelMenu extends javax.swing.JMenu implements Serializable
  - Serialized Fields
    - mainFrame
```
REpiceaFrame mainFrame
```
- Class repicea.gui.REpiceaMenuItem extends javax.swing.JMenuItem implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - taskMaker
```
GenericTaskFactory taskMaker
```
- Class repicea.gui.REpiceaPanel extends javax.swing.JPanel implements Serializable
Package repicea.gui.components
- Class repicea.gui.components.NumberFormatFieldFactory.JFormattedNumericField extends javax.swing.JFormattedTextField implements Serializable
 - Serialized Fields
 - listeners
```
java.util.concurrent.CopyOnWriteArrayList<E> listeners
```
 - type
```
NumberFormatFieldFactory.Type type
```
- Class repicea.gui.components.NumberFormatFieldFactory.NumberFieldDocument extends javax.swing.text.PlainDocument implements Serializable
 - Serialized Fields
 - nullAllowed
```
boolean nullAllowed
```
 - numberFormatter
```
repicea.gui.components.NumberFormatFieldFactory.NumberFormatter numberFormatter
```
 - isReplacing
```
boolean isReplacing
```
 - owner
```
NumberFormatFieldFactory.JFormattedNumericField owner
```
- Class repicea.gui.components.NumberFormatFieldFactory.NumberFieldDocument.NumberFieldEvent extends java.util.EventObject implements Serializable
 - Serialized Fields
 - type
```
javax.swing.event.DocumentEvent.EventType type
```
- Class repicea.gui.components.REpiceaCellEditor extends javax.swing.DefaultCellEditor implements Serializable
 - Serialized Fields
 - row
```
int row
```
 - column
```
int column
```
 - tableModel
```
REpiceaTableModel tableModel
```
- Class repicea.gui.components.REpiceaComboBoxOpenButton extends REpiceaPanel implements Serializable
 - Serialized Fields
 - comboBox
```
javax.swing.JComboBox<E> comboBox
```
 - openButton
```
javax.swing.JButton openButton
```
 - propertyListeners
```
java.util.concurrent.CopyOnWriteArrayList<E> propertyListeners
```
- Class repicea.gui.components.REpiceaMatchSelectorDialog extends REpiceaDialog implements Serializable
 - Serialized Fields
 - caller
```
REpiceaMatchSelector<E extends java.lang.Enum<E>> caller
```
 - table
```
REpiceaTable table
```
 - tableModel
```
REpiceaTableModel tableModel
```
 - load
```
javax.swing.JMenuItem load
```
 - save
```
javax.swing.JMenuItem save
```
 - saveAs
```
javax.swing.JMenuItem saveAs
```
 - windowSettings
```
WindowSettings windowSettings
```
 - okButton
```
javax.swing.JButton okButton
```
 - cancelButton
```
javax.swing.JButton cancelButton
```
 - isCancelled
```
boolean isCancelled
```
- Class repicea.gui.components.REpiceaScrollPane extends javax.swing.JScrollPane implements Serializable
- Class repicea.gui.components.REpiceaScrollPane.REpiceaViewport extends javax.swing.JViewport implements Serializable
 - Serialized Fields
 - viewPositionVetoEnabled
```
boolean viewPositionVetoEnabled
```
- Class repicea.gui.components.REpiceaSlider extends REpiceaPanel implements Serializable
 - Serialized Fields
 - token
```
java.lang.String token
```
 - sliderLabel
```
javax.swing.JLabel sliderLabel
```
 - slider
```
javax.swing.JSlider slider
```
 - selectedPosition
```
REpiceaSlider.Position selectedPosition
```
- Class repicea.gui.components.REpiceaTabbedPane extends javax.swing.JTabbedPane implements Serializable
 - Serialized Fields
 - closeTabEnabled
```
boolean closeTabEnabled
```
 - popupMenu
```
REpiceaPopupMenu popupMenu
```
 - closeButton
```
javax.swing.JMenuItem closeButton
```
 - closeAllButton
```
javax.swing.JMenuItem closeAllButton
```
 - closeOtherButton
```
javax.swing.JMenuItem closeOtherButton
```
- Class repicea.gui.components.REpiceaTabbedPane.TabTitleComponent extends REpiceaPanel implements Serializable
 - Serialized Fields
 - closeButton
```
javax.swing.JButton closeButton
```
 - title
```
java.lang.String title
```
 - comp
```
java.awt.Component comp
```
 - colorBeforeEntering
```
java.awt.Color colorBeforeEntering
```
- Class repicea.gui.components.REpiceaTable extends javax.swing.JTable implements Serializable
 - Serialized Fields
 - popupMenu
```
REpiceaPopupMenu popupMenu
```
 - addItem
```
javax.swing.JMenuItem addItem
```
 - deleteItem
```
javax.swing.JMenuItem deleteItem
```
- Class repicea.gui.components.REpiceaTableModel extends javax.swing.table.DefaultTableModel implements Serializable
 - Serialized Fields
 - dataSet
```
DataSet dataSet
```
 - columnClass
```
java.util.List<E> columnClass
```
 - vetos
```
java.util.Map<K,V> vetos
```
Package repicea.gui.dnd
- Class repicea.gui.dnd.DnDPanel extends REpiceaScrollPane implements Serializable
 - Serialized Fields
 - manager
```
ListManager manager
```
 - internalPanel
```
DnDPanel.InternalPanel internalPanel
```
- Class repicea.gui.dnd.DnDPanel.InternalEmbeddingPanel extends javax.swing.JPanel implements Serializable
- Class repicea.gui.dnd.DnDPanel.InternalPanel extends REpiceaPanel implements Serializable
- Class repicea.gui.dnd.ReplaceTextTransferHandler extends javax.swing.TransferHandler implements Serializable
 - Serialized Fields
 - owner
```
java.awt.Component owner
```
Package repicea.gui.genericwindows
- Class repicea.gui.genericwindows.CancellableWarningMessage extends REpiceaDialog implements Serializable
 - Serialized Fields
 - disableThisDialog
```
javax.swing.JCheckBox disableThisDialog
```
 - ok
```
javax.swing.JButton ok
```
 - cancel
```
javax.swing.JButton cancel
```
 - m_StrWarningMessage
```
java.lang.String m_StrWarningMessage
```
 - isCancelled
```
boolean isCancelled
```
- Class repicea.gui.genericwindows.GenericChooseFileDialog extends REpiceaDialog implements Serializable
 - Serialized Fields
 - ok
```
javax.swing.JButton ok
```
 - cancel
```
javax.swing.JButton cancel
```
 - browse
```
javax.swing.JButton browse
```
 - textField
```
javax.swing.JTextField textField
```
 - fileSelectionMode
```
int fileSelectionMode
```
 - fileFilters
```
java.util.List<E> fileFilters
```
 - isValidated
```
boolean isValidated
```
 - message
```
java.lang.String message
```
- Class repicea.gui.genericwindows.REpiceaGenericShowDialog extends REpiceaDialog implements Serializable
 - Serialized Fields
 - filePath
```
java.lang.String filePath
```
- Class repicea.gui.genericwindows.REpiceaLicenseWindow extends REpiceaGenericShowDialog implements Serializable
 
 serialVersionUID:
 
 20120104L
 - Serialized Fields
 - continueButton
```
javax.swing.JButton continueButton
```
 - cancelButton
```
javax.swing.JButton cancelButton
```
 - acceptingLicenseButton
```
javax.swing.JRadioButton acceptingLicenseButton
```
 - licenseHasBeenAccepted
```
boolean licenseHasBeenAccepted
```
- Class repicea.gui.genericwindows.REpiceaProgressBarDialog extends REpiceaDialog implements Serializable
 - Serialized Fields
 - titleString
```
java.lang.String titleString
```
 - parms
```
java.util.List<E> parms
```
 - currentJobId
```
int currentJobId
```
- Class repicea.gui.genericwindows.REpiceaSimpleListDialog extends REpiceaDialog implements Serializable
 - Serialized Fields
 - m_oList
```
javax.swing.JList<E> m_oList
```
 - ok
```
javax.swing.JButton ok
```
 - cancel
```
javax.swing.JButton cancel
```
 - strText
```
java.lang.String strText
```
 - isValidated
```
boolean isValidated
```
- Class repicea.gui.genericwindows.REpiceaSplashWindow extends javax.swing.JDialog implements Serializable
 - Serialized Fields
 - splashTimer
```
java.util.Timer splashTimer
```
 - imagePath
```
java.lang.String imagePath
```
 - bottomMessage
```
java.lang.String bottomMessage
```
- Class repicea.gui.genericwindows.REpiceaTipDialog extends REpiceaGenericShowDialog implements Serializable
 - Serialized Fields
 - doNotShowAnymore
```
javax.swing.JCheckBox doNotShowAnymore
```
 - close
```
javax.swing.JButton close
```
 - title
```
java.lang.String title
```
Package repicea.gui.popup
- Class repicea.gui.popup.REpiceaPopupMenu extends javax.swing.JPopupMenu implements Serializable
Package repicea.io
- Class repicea.io.GRecordSet extends java.util.ArrayList<GExportRecord> implements Serializable
 
 serialVersionUID:
 
 20110410L
- Class repicea.io.RelativePathFile extends java.io.File implements Serializable
 
 serialVersionUID:
 
 20120106L
 - Serialized Fields
 - rootPathname
```
java.lang.String rootPathname
```
 - relativePathParts
```
java.util.Vector<E> relativePathParts
```
- Class repicea.io.REpiceaRecordSet extends java.util.concurrent.LinkedBlockingQueue<GExportRecord> implements Serializable
 - Serialized Fields
 - saveThread
```
java.lang.Thread saveThread
```
 - lock
```
java.lang.Object lock
```
Package repicea.io.javadbf
- Class repicea.io.javadbf.DBFException extends java.io.IOException implements Serializable
  
  serialVersionUID:
  
  1L
Package repicea.io.tools
- Class repicea.io.tools.ExportTool.InternalSwingWorkerForRecordSet extends AbstractGenericTask implements Serializable
 - Serialized Fields
 - exportOption
```
java.lang.Enum<E extends java.lang.Enum<E>> exportOption
```
 - recordSet
```
GRecordSet recordSet
```
- Class repicea.io.tools.ExportToolDialog extends REpiceaDialog implements Serializable
 
 serialVersionUID:
 
 20110124L
 - Serialized Fields
 - caller
```
ExportTool caller
```
 Deprecated.
 - ok
```
javax.swing.JButton ok
```
 Deprecated.
 - cancel
```
javax.swing.JButton cancel
```
 Deprecated.
 - help
```
javax.swing.JButton help
```
 Deprecated.
 - browse
```
javax.swing.JButton browse
```
 Deprecated.
 - pleaseSelectAFileLabel
```
javax.swing.JLabel pleaseSelectAFileLabel
```
 Deprecated.
 - filenameField
```
javax.swing.JTextField filenameField
```
 Deprecated.
 - optionList
```
javax.swing.JList<E> optionList
```
 Deprecated.
 - selectAnOptionTextArea
```
javax.swing.JTextArea selectAnOptionTextArea
```
 Deprecated.
 - optionTitleLabel
```
javax.swing.JLabel optionTitleLabel
```
 Deprecated.
 - triggerRecordSetAndSaveManually
```
boolean triggerRecordSetAndSaveManually
```
 Deprecated.
- Class repicea.io.tools.ImportFieldElement extends java.lang.Object implements Serializable
 
 serialVersionUID:
 
 20100804L
 - Serialized Fields
 - description
```
java.lang.String description
```
 - fieldName
```
java.lang.String fieldName
```
 - propertyName
```
java.lang.String propertyName
```
 - matchingFieldIndex
```
int matchingFieldIndex
```
 - isOptional
```
boolean isOptional
```
 - helpDescription
```
java.lang.String helpDescription
```
 - fieldTypeClass
```
ImportFieldElement.FieldType fieldTypeClass
```
 - fieldID
```
java.lang.Enum<E extends java.lang.Enum<E>> fieldID
```
- Class repicea.io.tools.ImportFieldElementPanel.DnDJTextField extends javax.swing.JTextArea implements Serializable
- Class repicea.io.tools.ImportFieldManager extends java.lang.Object implements Serializable
 
 serialVersionUID:
 
 20100804L
 - Serialized Fields
 - importFieldElementMap
```
java.util.Map<K,V> importFieldElementMap
```
 - importFieldElementIndex
```
java.util.List<E> importFieldElementIndex
```
 - stratumFieldEnum
```
java.lang.Enum<E extends java.lang.Enum<E>> stratumFieldEnum
```
 - fileSpec
```
java.lang.String[] fileSpec
```
 - ifeFilename
```
java.lang.String ifeFilename
```
 - userValidated
```
boolean userValidated
```
- Class repicea.io.tools.ImportFieldManagerDialog extends REpiceaDialog implements Serializable
 - Serialized Fields
 - caller
```
ImportFieldManager caller
```
 - fieldListInFile
```
javax.swing.JList<E> fieldListInFile
```
 - fieldMatchPanel
```
javax.swing.JPanel fieldMatchPanel
```
 - ok
```
javax.swing.JButton ok
```
 - cancel
```
javax.swing.JButton cancel
```
 - help
```
javax.swing.JMenuItem help
```
 - load
```
javax.swing.JMenuItem load
```
 - save
```
javax.swing.JMenuItem save
```
 - saveAs
```
javax.swing.JMenuItem saveAs
```
 - infoWindowMaker
```
javax.swing.PopupFactory infoWindowMaker
```
 - infoWindow
```
javax.swing.Popup infoWindow
```
 - selectedField
```
javax.swing.JTextArea selectedField
```
 - windowSettings
```
WindowSettings windowSettings
```
- Class repicea.io.tools.REpiceaExportTool.InternalSwingWorkerForRecordSet extends AbstractGenericTask implements Serializable
 - Serialized Fields
 - exportOption
```
java.lang.Enum<E extends java.lang.Enum<E>> exportOption
```
 - saveThread
```
repicea.io.tools.REpiceaExportTool.InternalWorkerForSaveMethod saveThread
```
 - recordSet
```
REpiceaRecordSet recordSet
```
- Class repicea.io.tools.REpiceaExportToolDialog extends REpiceaDialog implements Serializable
 
 serialVersionUID:
 
 20110124L
 - Serialized Fields
 - caller
```
REpiceaExportTool caller
```
 - ok
```
javax.swing.JButton ok
```
 - cancel
```
javax.swing.JButton cancel
```
 - help
```
javax.swing.JButton help
```
 - browse
```
javax.swing.JButton browse
```
 - pleaseSelectAFileLabel
```
javax.swing.JLabel pleaseSelectAFileLabel
```
 - filenameField
```
javax.swing.JTextField filenameField
```
 - optionList
```
javax.swing.JList<E> optionList
```
 - selectAnOptionTextArea
```
javax.swing.JTextArea selectAnOptionTextArea
```
 - optionTitleLabel
```
javax.swing.JLabel optionTitleLabel
```
 - triggerRecordSetAndSaveManually
```
boolean triggerRecordSetAndSaveManually
```
- Class repicea.io.tools.REpiceaRecordReader extends java.lang.Object implements Serializable
 
 serialVersionUID:
 
 20101220L
 - Serialized Fields
 - selectedGroupId
```
int selectedGroupId
```
 - importFieldManager
```
ImportFieldManager importFieldManager
```
 - groupingRegistryReader
```
repicea.io.tools.GroupingRegistryReader groupingRegistryReader
```
 - isPopUpWindowEnabled
```
boolean isPopUpWindowEnabled
```
 - guiMode
```
UseModeProvider.UseMode guiMode
```
- Class repicea.io.tools.REpiceaRecordReader.InternalTask extends AbstractGenericTask implements Serializable
 - Serialized Fields
 - groupId
```
int groupId
```
- Class repicea.io.tools.REpiceaRecordReader.NullInThisFieldException extends java.lang.NullPointerException implements Serializable
 - Serialized Fields
 - ife
```
ImportFieldElement ife
```
- Class repicea.io.tools.REpiceaRecordReader.VariableValueException extends java.lang.Exception implements Serializable
 
 serialVersionUID:
 
 20101221L
Package repicea.lang
- Class repicea.lang.MemoryWatchDog.ExpectedMemoryCapacityException extends java.lang.RuntimeException implements Serializable
  
  serialVersionUID:
  
  20110330L
Package repicea.lang.codetranslator
- Class repicea.lang.codetranslator.REnvironment extends java.util.concurrent.ConcurrentHashMap<java.lang.Integer,java.lang.Object> implements Serializable
Package repicea.math
- Class repicea.math.AbstractMathematicalFunction extends java.lang.Object implements Serializable
 - Serialized Fields
 - parameterBounds
```
java.util.Map<K,V> parameterBounds
```
 - parameterValues
```
FastArrayList<T extends java.io.Serializable> parameterValues
```
 - variableValues
```
FastArrayList<T extends java.io.Serializable> variableValues
```
- Class repicea.math.AbstractMathematicalFunctionWrapper extends AbstractMathematicalFunction implements Serializable
 - Serialized Fields
 - originalFunction
```
AbstractMathematicalFunction originalFunction
```
- Class repicea.math.ExponentialFunctionWrapper extends AbstractMathematicalFunctionWrapper implements Serializable
- Class repicea.math.FastArrayList extends java.lang.Object implements Serializable
 - Serialized Fields
 - capacity
```
int capacity
```
 - length
```
int length
```
 - internalArray
```
java.lang.Object[] internalArray
```
- Class repicea.math.LogFunctionWrapper extends AbstractMathematicalFunctionWrapper implements Serializable
- Class repicea.math.Matrix extends java.lang.Object implements Serializable
 
 serialVersionUID:
 
 20100804L
 - Serialized Fields
 - m_afData
```
double[][] m_afData
```
 - m_iRows
```
int m_iRows
```
 - m_iCols
```
int m_iCols
```
- Class repicea.math.ParameterBound extends java.lang.Object implements Serializable
 - Serialized Fields
 - lowerBound
```
java.lang.Double lowerBound
```
 - upperBound
```
java.lang.Double upperBound
```
Package repicea.math.optimizer
- Class repicea.math.optimizer.AbstractOptimizer.OptimizationException extends java.lang.Exception implements Serializable
  
  serialVersionUID:
  
  20110614L
Package repicea.multiprocess
- Class repicea.multiprocess.CmdProcess extends repicea.multiprocess.AbstractIndependentProcess implements Serializable
 
 serialVersionUID:
 
 20111104L
 - Serialized Fields
 - commands
```
java.util.List<E> commands
```
 - workingDirectory
```
java.io.File workingDirectory
```
- Class repicea.multiprocess.JavaProcess extends repicea.multiprocess.AbstractIndependentProcess implements Serializable
 
 serialVersionUID:
 
 20111028L
 - Serialized Fields
 - commands
```
java.util.List<E> commands
```
 - environment
```
java.util.Map<K,V> environment
```
 - workingDirectory
```
java.io.File workingDirectory
```
 - jvmOptions
```
java.util.Map<K,V> jvmOptions
```
- Class repicea.multiprocess.JavaProcessWrapper extends AbstractGenericTask implements Serializable
 
 serialVersionUID:
 
 20120218L
 - Serialized Fields
 - internalProcess
```
JavaProcess internalProcess
```
 - atLeastOneMessageReceived
```
boolean atLeastOneMessageReceived
```
Package repicea.net
- Class repicea.net.RemoteActionListener extends RemoteListener implements Serializable
  
  serialVersionUID:
  
  20111227L
- Class repicea.net.RemoteEvent extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - targetHashCode
```
int targetHashCode
```
    - event
```
java.util.EventObject event
```
- Class repicea.net.RemoteListener extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  20111223L
  - Serialized Fields
    - remoteOwnerHashCode
```
int remoteOwnerHashCode
```
    - remoteOwnerClassName
```
java.lang.String remoteOwnerClassName
```
    - connector
```
RemoteEventManager connector
```
- Class repicea.net.RemotePropertyChangeListener extends RemoteListener implements Serializable
  
  serialVersionUID:
  
  20111223L
Package repicea.net.server
- Class repicea.net.server.BasicClient.BasicClientException extends java.lang.Exception implements Serializable
- Class repicea.net.server.ServerConfiguration extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  20111222L
  - Serialized Fields
    - numberOfClientThreads
```
int numberOfClientThreads
```
    - maxSizeOfWaitingList
```
int maxSizeOfWaitingList
```
    - outerPort
```
int outerPort
```
    - innerPort
```
java.lang.Integer innerPort
```
    - protocol
```
ServerConfiguration.Protocol protocol
```
- Class repicea.net.server.ServerTask extends AbstractGenericTask implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - taskID
```
ServerTask.ServerTaskID taskID
```
    - server
```
AbstractServer server
```

Package repicea.net.server.gui

Class repicea.net.server.gui.ClientThreadPanel extends javax.swing.JPanel implements Serializable

serialVersionUID:

20111018L
- Serialized Fields
  - restartButton
```
javax.swing.JButton restartButton
```
  - monitorBar
```
javax.swing.JProgressBar monitorBar
```
  - threadIDLabel
```
javax.swing.JLabel threadIDLabel
```
  - statusLabel
```
javax.swing.JLabel statusLabel
```
  - horizontalStrut_2
```
java.awt.Component horizontalStrut_2
```
  - clientIDLabel
```
javax.swing.JLabel clientIDLabel
```
  - workerID
```
int workerID
```

Class repicea.net.server.gui.ServerDialog extends REpiceaFrame implements Serializable

serialVersionUID:: 20111018L

Serialized Fields

menuBar
```
javax.swing.JMenuBar menuBar
```
fileMenu
```
javax.swing.JMenu fileMenu
```
serverMenu
```
javax.swing.JMenu serverMenu
```
mntmQuit
```
javax.swing.JMenuItem mntmQuit
```
mntmConnect
```
javax.swing.JMenuItem mntmConnect
```
mntmDisconnect
```
javax.swing.JMenuItem mntmDisconnect
```
mntmShutdown
```
javax.swing.JMenuItem mntmShutdown
```
mainPanel
```
javax.swing.JPanel mainPanel
```
connected
```
boolean connected
```
clientThreadPanels
```
java.util.Vector<E> clientThreadPanels
```
caller
```
ServerInterfaceEngine caller
```

Package repicea.serial
- Class repicea.serial.MemorizerPackage extends java.util.ArrayList<java.io.Serializable> implements Serializable
 
 serialVersionUID:
 
 20110103L
Package repicea.serial.cloner
- Class repicea.serial.cloner.BasicSerialCloner extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  20120211L
  - Serialized Fields
    - oos
```
java.io.ObjectOutputStream oos
```
    - deserializer
```
repicea.serial.cloner.BasicSerialCloner.Deserializer deserializer
```
    - pis
```
java.io.PipedInputStream pis
```
Package repicea.serial.xml
- Class repicea.serial.xml.XmlMarshallException extends java.io.IOException implements Serializable
Package repicea.simulation
- Class repicea.simulation.HierarchicalLevel extends java.lang.Object implements Serializable
 - Serialized Fields
 - levelName
```
java.lang.String levelName
```
- Class repicea.simulation.ModelParameterEstimates extends GaussianEstimate implements Serializable
 - Serialized Fields
 - estimatedParameterIndices
```
java.util.List<E> estimatedParameterIndices
```
- Class repicea.simulation.ParameterMap extends java.lang.Object implements Serializable
 - Serialized Fields
 - parametersMap
```
java.util.Map<K,V> parametersMap
```
- Class repicea.simulation.REpiceaBinaryEventPredictor extends REpiceaPredictor implements Serializable
 
 serialVersionUID:
 
 20131015L
- Class repicea.simulation.REpiceaPredictor extends SensitivityAnalysisParameter<ModelParameterEstimates> implements Serializable
 - Serialized Fields
 - listeners
```
java.util.concurrent.CopyOnWriteArrayList<E> listeners
```
 - cruiseLineMap
```
java.util.Map<K,V> cruiseLineMap
```
 - intervalLists
```
java.util.Map<K,V> intervalLists
```
 - isRandomEffectsVariabilityEnabled
```
boolean isRandomEffectsVariabilityEnabled
```
 - isResidualVariabilityEnabled
```
boolean isResidualVariabilityEnabled
```
 - oXVector
```
Matrix oXVector
```
 - defaultRandomEffects
```
java.util.Map<K,V> defaultRandomEffects
```
 - blupsRandomEffects
```
java.util.Map<K,V> blupsRandomEffects
```
 - subjectTestedForBlups
```
java.util.Map<K,V> subjectTestedForBlups
```
 - simulatedRandomEffects
```
java.util.Map<K,V> simulatedRandomEffects
```
 - defaultResidualError
```
java.util.Map<K,V> defaultResidualError
```
 - simulatedResidualError
```
java.util.Map<K,V> simulatedResidualError
```
- Class repicea.simulation.REpiceaPredictor.CruiseLine extends java.lang.Object implements Serializable
 - Serialized Fields
 - subjectID
```
java.lang.String subjectID
```
 - monteCarloRealizationID
```
int monteCarloRealizationID
```
- Class repicea.simulation.REpiceaPredictor.IntervalNestedInPlotDefinition extends java.lang.Object implements Serializable
 - Serialized Fields
 - monteCarloRealizationID
```
int monteCarloRealizationID
```
 - subjectID
```
java.lang.String subjectID
```
- Class repicea.simulation.SASParameterEstimates extends ModelParameterEstimates implements Serializable
- Class repicea.simulation.SensitivityAnalysisParameter extends java.lang.Object implements Serializable
 - Serialized Fields
 - simulatedParameters
```
java.util.Map<K,V> simulatedParameters
```
 - parameterEstimates
```
Estimate<D extends Distribution> parameterEstimates
```
 - isParametersVariabilityEnabled
```
boolean isParametersVariabilityEnabled
```
Package repicea.simulation.climate
- Class repicea.simulation.climate.REpiceaClimateChangeTrend extends java.util.ArrayList<repicea.simulation.climate.REpiceaClimateChangeTrendSegment> implements Serializable
- Class repicea.simulation.climate.REpiceaClimateVariableChangeMap extends java.util.HashMap<REpiceaClimateVariableMap.ClimateVariable,java.lang.Double> implements Serializable
- Class repicea.simulation.climate.REpiceaClimateVariableMap extends java.util.HashMap<REpiceaClimateVariableMap.ClimateVariable,java.lang.Double> implements Serializable
Package repicea.simulation.hdrelationships
- Class repicea.simulation.hdrelationships.HDRelationshipPredictor extends REpiceaPredictor implements Serializable
 - Serialized Fields
 - observedHeights
```
java.util.Map<K,V> observedHeights
```
- Class repicea.simulation.hdrelationships.HDRelationshipPredictor.GaussianErrorTermForHeight extends GaussianErrorTerm implements Serializable
Package repicea.simulation.processsystem
- Class repicea.simulation.processsystem.AbstractProcessorLinkLine extends repicea.simulation.processsystem.AbstractPermissionProviderButton implements Serializable
 - Serialized Fields
 - panel
```
SystemPanel panel
```
 - fatherAnchor
```
AnchorProvider fatherAnchor
```
 - sonAnchor
```
AnchorProvider sonAnchor
```
- Class repicea.simulation.processsystem.AmountMap extends java.util.HashMap<E extends java.lang.Enum<?>,java.lang.Double> implements Serializable
- Class repicea.simulation.processsystem.DnDCompatibleButton extends SelectableJButton implements Serializable
- Class repicea.simulation.processsystem.PreProcessorLinkLine extends AbstractProcessorLinkLine implements Serializable
 - Serialized Fields
 - mouseAdapter
```
PreProcessorLinkLine.InternalMouseMotionListener mouseAdapter
```
- Class repicea.simulation.processsystem.Processor extends java.lang.Object implements Serializable
 - Serialized Fields
 - originalLocation
```
java.awt.Point originalLocation
```
 - subProcessorIntakes
```
java.util.Map<K,V> subProcessorIntakes
```
 - subProcessors
```
java.util.List<E> subProcessors
```
 - name
```
java.lang.String name
```
 - isTerminal
```
boolean isTerminal
```
 - averageIntake
```
double averageIntake
```
 Deprecated.
 - markedAsPartOfEndlessLoop
```
boolean markedAsPartOfEndlessLoop
```
- Class repicea.simulation.processsystem.ProcessorButton extends SelectableJButton implements Serializable
 - Serialized Fields
 - process
```
Processor process
```
 - buttonMoveRecognizer
```
DragGestureMoveComponentHandler<C extends java.awt.Component> buttonMoveRecognizer
```
 - createLinkRecognizer
```
java.awt.dnd.DragGestureRecognizer createLinkRecognizer
```
 - label
```
SystemLabel label
```
 - panel
```
SystemPanel panel
```
 - hasChanged
```
boolean hasChanged
```
- Class repicea.simulation.processsystem.ProcessorInternalDialog extends REpiceaDialog implements Serializable
 - Serialized Fields
 - caller
```
Processor caller
```
 - processorTextField
```
javax.swing.JTextField processorTextField
```
 - bottomComponent
```
javax.swing.JPanel bottomComponent
```
 - topComponent
```
javax.swing.JPanel topComponent
```
- Class repicea.simulation.processsystem.ProcessorLinkLine extends ValidProcessorLinkLine implements Serializable
 - Serialized Fields
 - label
```
SystemLabel label
```
- Class repicea.simulation.processsystem.ProcessorLinkLineSlider extends REpiceaDialog implements Serializable
 - Serialized Fields
 - linkLine
```
ProcessorLinkLine linkLine
```
 - slider
```
javax.swing.JSlider slider
```
 - setToAppropriateValue
```
javax.swing.JButton setToAppropriateValue
```
- Class repicea.simulation.processsystem.SelectableJButton extends repicea.simulation.processsystem.AbstractPermissionProviderButton implements Serializable
 - Serialized Fields
 - originalIcon
```
javax.swing.ImageIcon originalIcon
```
 - borderWidth
```
int borderWidth
```
 - borderColor
```
java.awt.Color borderColor
```
- Class repicea.simulation.processsystem.SystemLabel extends javax.swing.JLabel implements Serializable
 - Serialized Fields
 - originalFont
```
java.awt.Font originalFont
```
- Class repicea.simulation.processsystem.SystemManagerDialog extends REpiceaDialog implements Serializable
 - Serialized Fields
 - systemPanel
```
SystemPanel systemPanel
```
 - toolPanel
```
ToolPanel toolPanel
```
 - caller
```
SystemManager caller
```
 - load
```
javax.swing.JMenuItem load
```
 - save
```
javax.swing.JMenuItem save
```
 - saveAs
```
javax.swing.JMenuItem saveAs
```
 - close
```
javax.swing.JMenuItem close
```
 - reset
```
javax.swing.JMenuItem reset
```
 - help
```
javax.swing.JMenuItem help
```
 - undo
```
javax.swing.JMenuItem undo
```
 - redo
```
javax.swing.JMenuItem redo
```
 - enlarge
```
javax.swing.JCheckBoxMenuItem enlarge
```
 - previousDimension
```
java.awt.Dimension previousDimension
```
 - zoomSlider
```
javax.swing.JSlider zoomSlider
```
 - windowSettings
```
WindowSettings windowSettings
```
- Class repicea.simulation.processsystem.SystemPanel extends DnDPanel<Processor> implements Serializable
 - Serialized Fields
 - linkLines
```
java.util.List<E> linkLines
```
 - processorButtons
```
java.util.List<E> processorButtons
```
 - currentMode
```
java.lang.Enum<E extends java.lang.Enum<E>> currentMode
```
 - futureLink
```
PreProcessorLinkLine futureLink
```
- Class repicea.simulation.processsystem.SystemPanel.SystemInternalPanel extends DnDPanel.InternalPanel implements Serializable
- Class repicea.simulation.processsystem.ToolButton extends SelectableJButton implements Serializable
 - Serialized Fields
 - mode
```
java.lang.Enum<E extends java.lang.Enum<E>> mode
```
- Class repicea.simulation.processsystem.ToolPanel extends REpiceaPanel implements Serializable
 - Serialized Fields
 - selectableButtons
```
java.util.List<E> selectableButtons
```
 - dndButtons
```
java.util.List<E> dndButtons
```
 - createProcessorButton
```
DnDCompatibleButton createProcessorButton
```
 - createLinkButton
```
ToolButton createLinkButton
```
 - simpleSelectionButton
```
ToolButton simpleSelectionButton
```
 - owner
```
SystemPanel owner
```
- Class repicea.simulation.processsystem.ToolPanel.CreateLinkButton extends ToolButton implements Serializable
- Class repicea.simulation.processsystem.ToolPanel.CreateProcessorButton extends DnDCompatibleButton implements Serializable
- Class repicea.simulation.processsystem.ToolPanel.MoveProcessorButton extends ToolButton implements Serializable
- Class repicea.simulation.processsystem.ValidProcessorLinkLine extends AbstractProcessorLinkLine implements Serializable
Package repicea.simulation.stemtaper
- Class repicea.simulation.stemtaper.AbstractStemTaperEstimate extends Estimate<Distribution> implements Serializable
 - Serialized Fields
 - heights
```
java.util.List<E> heights
```
 - volumeEstimate
```
Estimate<D extends Distribution> volumeEstimate
```
- Class repicea.simulation.stemtaper.AbstractStemTaperPredictor extends REpiceaPredictor implements Serializable
- Class repicea.simulation.stemtaper.StemTaperSegmentList extends java.util.ArrayList<StemTaperSegment> implements Serializable
 
 serialVersionUID:
 
 20120713L
Package repicea.simulation.treelogger
- Class repicea.simulation.treelogger.LogCategory extends java.lang.Object implements Serializable
 
 serialVersionUID:
 
 20100804L
 - Serialized Fields
 - name
```
java.lang.String name
```
 - species
```
java.lang.Object species
```
 - isFromStump
```
boolean isFromStump
```
- Class repicea.simulation.treelogger.LogCategoryPanel extends REpiceaPanel implements Serializable
 - Serialized Fields
 - logCategory
```
LogCategory logCategory
```
 - nameTextField
```
javax.swing.JTextField nameTextField
```
- Class repicea.simulation.treelogger.TreeLoggerEvent extends java.util.EventObject implements Serializable
- Class repicea.simulation.treelogger.TreeLoggerParameters extends java.lang.Object implements Serializable
 - Serialized Fields
 - treeLoggerClass
```
java.lang.String treeLoggerClass
```
 - selectedLogCategories
```
java.util.Map<K,V> selectedLogCategories
```
 - filename
```
java.lang.String filename
```
- Class repicea.simulation.treelogger.TreeLoggerParametersDialog extends REpiceaDialog implements Serializable
 - Serialized Fields
 - params
```
TreeLoggerParameters<LC extends LogCategory> params
```
 - panLogCategory
```
javax.swing.JPanel panLogCategory
```
 - logCategoryList
```
TreeLoggerParametersDialog.CustomJList logCategoryList
```
 - speciesList
```
TreeLoggerParametersDialog.CustomJList speciesList
```
 - ok
```
javax.swing.JButton ok
```
 - cancel
```
javax.swing.JButton cancel
```
 - mnFile
```
javax.swing.JMenu mnFile
```
 - save
```
javax.swing.JMenuItem save
```
 - saveAs
```
javax.swing.JMenuItem saveAs
```
 - load
```
javax.swing.JMenuItem load
```
 - mnEdit
```
javax.swing.JMenu mnEdit
```
 - undo
```
javax.swing.JMenuItem undo
```
 - redo
```
javax.swing.JMenuItem redo
```
 - defaultValues
```
javax.swing.JMenuItem defaultValues
```
 - mnSpecies
```
javax.swing.JMenu mnSpecies
```
 - speciesAdd
```
javax.swing.JMenuItem speciesAdd
```
 - speciesRemove
```
javax.swing.JMenuItem speciesRemove
```
 - mnLogGrade
```
javax.swing.JMenu mnLogGrade
```
 - logGradeAdd
```
javax.swing.JMenuItem logGradeAdd
```
 - logGradeRemove
```
javax.swing.JMenuItem logGradeRemove
```
 - mnTools
```
javax.swing.JMenu mnTools
```
 - settingsMenuItem
```
javax.swing.JMenuItem settingsMenuItem
```
 - mnHelp
```
javax.swing.JMenu mnHelp
```
 - help
```
javax.swing.JMenuItem help
```
 - logGradeGoUp
```
javax.swing.JButton logGradeGoUp
```
 - logGradeGoDown
```
javax.swing.JButton logGradeGoDown
```
 - controlPanel
```
javax.swing.JPanel controlPanel
```
 - logGradePriorityChangeEnabled
```
boolean logGradePriorityChangeEnabled
```
 - windowSettings
```
WindowSettings windowSettings
```
- Class repicea.simulation.treelogger.TreeLoggerParametersDialog.CustomJList extends javax.swing.JList implements Serializable
- Class repicea.simulation.treelogger.WoodPiece extends java.lang.Object implements Serializable
 
 serialVersionUID:
 
 20100805L
 - Serialized Fields
 - id
```
int id
```
 - tree
```
LoggableTree tree
```
 - rank
```
int rank
```
 - withBark
```
boolean withBark
```
 - withPith
```
boolean withPith
```
 - logCategory
```
LogCategory logCategory
```
 - properties
```
java.util.Map<K,V> properties
```
Package repicea.stats
- Class repicea.stats.LinearStatisticalExpression extends AbstractMathematicalFunction implements Serializable
  - Serialized Fields
    - gradient
```
Matrix gradient
```
    - hessian
```
Matrix hessian
```
- Class repicea.stats.RandomVariable extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - distribution
```
Distribution distribution
```
- Class repicea.stats.REpiceaRandom extends java.util.Random implements Serializable
Package repicea.stats.data
- Class repicea.stats.data.DataBlock extends java.util.LinkedHashMap<java.lang.String,DataBlock> implements Serializable
 - Serialized Fields
 - hierarchicalLevel
```
java.lang.String hierarchicalLevel
```
 - subject
```
java.lang.String subject
```
 - parentBlock
```
DataBlock parentBlock
```
 - indices
```
java.util.List<E> indices
```
- Class repicea.stats.data.DataSet extends AbstractGenericTask implements Serializable
 - Serialized Fields
 - fieldNames
```
java.util.List<E> fieldNames
```
 - fieldTypes
```
java.util.List<E> fieldTypes
```
 - observations
```
java.util.List<E> observations
```
 - originalFilename
```
java.lang.String originalFilename
```
- Class repicea.stats.data.StatisticalDataException extends java.lang.Exception implements Serializable
 
 serialVersionUID:
 
 20110616L
Package repicea.stats.distributions
- Class repicea.stats.distributions.BasicBound extends java.lang.Object implements Serializable
 - Serialized Fields
 - isUpperBound
```
boolean isUpperBound
```
 - value
```
Matrix value
```
- Class repicea.stats.distributions.CenteredGaussianDistribution extends java.lang.Object implements Serializable
 - Serialized Fields
 - underlyingDistribution
```
GaussianDistribution underlyingDistribution
```
 - correlationParameter
```
double correlationParameter
```
 - type
```
StatisticalUtility.TypeMatrixR type
```
 - isStructured
```
boolean isStructured
```
 - structuredVarianceCovarianceMap
```
java.util.Map<K,V> structuredVarianceCovarianceMap
```
 - structuredLowerCholeskyMap
```
java.util.Map<K,V> structuredLowerCholeskyMap
```
 - simpleVarianceCovarianceMap
```
java.util.Map<K,V> simpleVarianceCovarianceMap
```
 - simpleLowerCholeskyMap
```
java.util.Map<K,V> simpleLowerCholeskyMap
```
- Class repicea.stats.distributions.ChiSquaredDistribution extends java.lang.Object implements Serializable
 
 serialVersionUID:
 
 20121114L
 - Serialized Fields
 - degreesOfFreedom
```
int degreesOfFreedom
```
 - mean
```
Matrix mean
```
 - variance
```
Matrix variance
```
 - lowerTriangleChol
```
Matrix lowerTriangleChol
```
 - upperTriangleChol
```
Matrix upperTriangleChol
```
- Class repicea.stats.distributions.EmpiricalDistribution extends java.lang.Object implements Serializable
 
 serialVersionUID:
 
 20120826L
 - Serialized Fields
 - observations
```
java.util.List<E> observations
```
- Class repicea.stats.distributions.GaussianDistribution extends StandardGaussianDistribution implements Serializable
- Class repicea.stats.distributions.GaussianErrorTerm extends java.lang.Object implements Serializable
 - Serialized Fields
 - distanceIndex
```
int distanceIndex
```
 - value
```
java.lang.Double value
```
 - normalizedValue
```
java.lang.Double normalizedValue
```
- Class repicea.stats.distributions.GaussianErrorTermList extends java.util.ArrayList<GaussianErrorTerm> implements Serializable
 - Serialized Fields
 - updated
```
boolean updated
```
- Class repicea.stats.distributions.StandardGaussianDistribution extends java.lang.Object implements Serializable
 - Serialized Fields
 - mu
```
Matrix mu
```
 - sigma2
```
Matrix sigma2
```
 - lowerCholTriangle
```
Matrix lowerCholTriangle
```
- Class repicea.stats.distributions.StudentTDistribution extends java.lang.Object implements Serializable
 - Serialized Fields
 - mu
```
Matrix mu
```
 - sigma2
```
Matrix sigma2
```
 - lowerCholTriangle
```
Matrix lowerCholTriangle
```
 - degreesOfFreedom
```
int degreesOfFreedom
```
- Class repicea.stats.distributions.TruncatedGaussianDistribution extends StandardGaussianDistribution implements Serializable
 
 serialVersionUID:
 
 -8980153249116737564L
 - Serialized Fields
 - lowerBound
```
TruncatedGaussianDistribution.Bound lowerBound
```
 - upperBound
```
TruncatedGaussianDistribution.Bound upperBound
```
- Class repicea.stats.distributions.TruncatedGaussianDistribution.Bound extends BasicBound implements Serializable
 
 serialVersionUID:
 
 -7435897095155443037L
 - Serialized Fields
 - isCompletelySet
```
boolean isCompletelySet
```
 - pdfValue
```
Matrix pdfValue
```
 - cdfValue
```
Matrix cdfValue
```
- Class repicea.stats.distributions.UniformDistribution extends java.lang.Object implements Serializable
 - Serialized Fields
 - upperBound
```
BasicBound upperBound
```
 - lowerBound
```
BasicBound lowerBound
```
- Class repicea.stats.distributions.UnknownDistribution extends java.lang.Object implements Serializable
 - Serialized Fields
 - mean
```
Matrix mean
```
 - variance
```
Matrix variance
```
Package repicea.stats.estimates
- Class repicea.stats.estimates.BootstrapHybridPointEstimate extends Estimate<UnknownDistribution> implements Serializable
 - Serialized Fields
 - estimates
```
java.util.List<E> estimates
```
- Class repicea.stats.estimates.CorrelationEstimate extends SimpleEstimate implements Serializable
 
 serialVersionUID:
 
 20110912L
 - Serialized Fields
 - sampleSize
```
int sampleSize
```
- Class repicea.stats.estimates.Estimate extends RandomVariable<D extends Distribution> implements Serializable
 
 serialVersionUID:
 
 20120825L
 - Serialized Fields
 - estimatorType
```
Estimate.EstimatorType estimatorType
```
 - rowIndex
```
java.util.List<E> rowIndex
```
- Class repicea.stats.estimates.GaussianErrorTermEstimate extends Estimate<CenteredGaussianDistribution> implements Serializable
- Class repicea.stats.estimates.GaussianEstimate extends Estimate<GaussianDistribution> implements Serializable
 
 serialVersionUID:
 
 20120725L
- Class repicea.stats.estimates.JackknifeEstimate extends repicea.stats.estimates.ResamplingBasedEstimate implements Serializable
 - Serialized Fields
 - n
```
int n
```
 - d
```
int d
```
- Class repicea.stats.estimates.LawOfTotalVarianceMonteCarloEstimate extends MonteCarloEstimate implements Serializable
 - Serialized Fields
 - realizations
```
java.util.List<E> realizations
```
- Class repicea.stats.estimates.LinkedGaussianEstimate extends GaussianEstimate implements Serializable
 - Serialized Fields
 - indexFirstEstimate
```
java.util.List<E> indexFirstEstimate
```
 - indexSecondEstimate
```
java.util.List<E> indexSecondEstimate
```
- Class repicea.stats.estimates.MonteCarloEstimate extends repicea.stats.estimates.ResamplingBasedEstimate implements Serializable
 
 serialVersionUID:
 
 20110912L
- Class repicea.stats.estimates.PointEstimate extends Estimate<GaussianDistribution> implements Serializable
 - Serialized Fields
 - observations
```
java.util.List<E> observations
```
 - nRows
```
int nRows
```
 - nCols
```
int nCols
```
 - populationSize
```
double populationSize
```
- Class repicea.stats.estimates.PopulationMeanEstimate extends PointEstimate<PopulationUnitWithEqualInclusionProbability> implements Serializable
 - Serialized Fields
 - sample
```
EmpiricalDistribution sample
```
- Class repicea.stats.estimates.PopulationTotalEstimate extends PointEstimate<PopulationUnitWithUnequalInclusionProbability> implements Serializable
- Class repicea.stats.estimates.SimpleEstimate extends Estimate<UnknownDistribution> implements Serializable
 
 serialVersionUID:
 
 20110912L
- Class repicea.stats.estimates.TruncatedGaussianEstimate extends Estimate<TruncatedGaussianDistribution> implements Serializable
 
 serialVersionUID:
 
 -1426033536030992926L
- Class repicea.stats.estimates.UniformEstimate extends Estimate<UniformDistribution> implements Serializable
- Class repicea.stats.estimates.VarianceEstimate extends Estimate<ChiSquaredDistribution> implements Serializable
 
 serialVersionUID:
 
 20121114L
Package repicea.stats.estimators
- Class repicea.stats.estimators.Estimator.EstimatorException extends java.lang.Exception implements Serializable
  
  serialVersionUID:
  
  20110614L
Package repicea.stats.integral
- Class repicea.stats.integral.AdaptativeGaussHermiteQuadrature extends GaussHermiteQuadrature implements Serializable
- Class repicea.stats.integral.CompositeSimpsonRule extends NumericalIntegrationMethod implements Serializable
 - Serialized Fields
 - numberOfSubintervals
```
int numberOfSubintervals
```
- Class repicea.stats.integral.GaussHermiteQuadrature extends GaussQuadrature implements Serializable
 - Serialized Fields
 - numberOfPoints
```
GaussQuadrature.NumberOfPoints numberOfPoints
```
- Class repicea.stats.integral.GaussLegendreQuadrature extends GaussQuadrature implements Serializable
 - Serialized Fields
 - numberOfPoints
```
GaussQuadrature.NumberOfPoints numberOfPoints
```
- Class repicea.stats.integral.GaussQuadrature extends NumericalIntegrationMethod implements Serializable
- Class repicea.stats.integral.LaplacianApproximation extends AdaptativeGaussHermiteQuadrature implements Serializable
- Class repicea.stats.integral.NumericalIntegrationMethod extends java.lang.Object implements Serializable
 - Serialized Fields
 - upperBound
```
double upperBound
```
 - lowerBound
```
double lowerBound
```
 - xValues
```
java.util.List<E> xValues
```
 - weights
```
java.util.List<E> weights
```
 - rescalingFactors
```
java.util.List<E> rescalingFactors
```
- Class repicea.stats.integral.TrapezoidalRule extends NumericalIntegrationMethod implements Serializable
 - Serialized Fields
 - resolution
```
double resolution
```
Package repicea.stats.model
- Class repicea.stats.model.CompositeLogLikelihood extends AbstractMathematicalFunctionWrapper implements Serializable
  - Serialized Fields
    - yValues
```
Matrix yValues
```
    - xValues
```
Matrix xValues
```
- Class repicea.stats.model.IndividualLikelihood extends AbstractMathematicalFunctionWrapper implements Serializable
  - Serialized Fields
    - observedValues
```
Matrix observedValues
```
- Class repicea.stats.model.IndividualLogLikelihood extends LogFunctionWrapper implements Serializable
Package repicea.stats.model.glm
- Class repicea.stats.model.glm.HosmerLemeshowTest.HosmerLemeshowSubgroup extends java.util.ArrayList<HosmerLemeshowTest.Couplet> implements Serializable
- Class repicea.stats.model.glm.LikelihoodGLM extends IndividualLikelihood implements Serializable
 - Serialized Fields
 - linkFunction
```
LinkFunction linkFunction
```
- Class repicea.stats.model.glm.LinkFunction extends AbstractMathematicalFunctionWrapper implements Serializable
 - Serialized Fields
 - type
```
LinkFunction.Type type
```
Package repicea.stats.model.glm.copula
- Class repicea.stats.model.glm.copula.CopulaExpression extends AbstractMathematicalFunctionWrapper implements Serializable
 - Serialized Fields
 - levels
```
java.util.List<E> levels
```
- Class repicea.stats.model.glm.copula.CopulaLibrary.DistanceLinkFunctionCopulaExpression extends CopulaExpression implements Serializable
 - Serialized Fields
 - linkFunction
```
LinkFunction linkFunction
```
 - matrixX
```
Matrix matrixX
```
 - distanceFieldsEnumeration
```
java.lang.String distanceFieldsEnumeration
```
 - data
```
HierarchicalSpatialDataStructure data
```
- Class repicea.stats.model.glm.copula.CopulaLibrary.SimpleCopulaExpression extends CopulaExpression implements Serializable
- Class repicea.stats.model.glm.copula.CopulaLibrary.SimpleLogisticCopulaExpression extends CopulaExpression implements Serializable
 - Serialized Fields
 - linkFunction
```
LinkFunction linkFunction
```
- Class repicea.stats.model.glm.copula.FGMCompositeLogLikelihood extends CompositeLogLikelihood implements Serializable
 - Serialized Fields
 - llk
```
double llk
```
 - llkUptoDate
```
boolean llkUptoDate
```
 - additionalLlkTerm
```
java.util.Map<K,V> additionalLlkTerm
```
 - additionalLlkTermUptoDate
```
boolean additionalLlkTermUptoDate
```
 - gradientVector
```
Matrix gradientVector
```
 - gradientVectorUptoDate
```
boolean gradientVectorUptoDate
```
 - additionalGradients
```
java.util.Map<K,V> additionalGradients
```
 - additionalGradientTermUptoDate
```
boolean additionalGradientTermUptoDate
```
 - hessianMatrix
```
Matrix hessianMatrix
```
 - hessianMatrixUptoDate
```
boolean hessianMatrixUptoDate
```
 - additionalHessians
```
java.util.Map<K,V> additionalHessians
```
 - additionalHessianTermUptoDate
```
boolean additionalHessianTermUptoDate
```
 - hierarchicalStructure
```
HierarchicalStatisticalDataStructure hierarchicalStructure
```
 - copulaExpression
```
CopulaExpression copulaExpression
```
Package repicea.util
- Class repicea.util.FixedSizeCopyOnWriteArrayList extends java.util.concurrent.CopyOnWriteArrayList<E> implements Serializable
 
 serialVersionUID:
 
 20111231L
 - Serialized Fields
 - maximumSize
```
int maximumSize
```
- Class repicea.util.Index extends java.util.HashMap<K,V> implements Serializable
 - Serialized Fields
 - valueMap
```
java.util.Map<K,V> valueMap
```

Serialized Form

Package lerfob.carbonbalancetool

Class lerfob.carbonbalancetool.AbstractDesigner extends java.lang.Object implements Serializable

Serialized Fields

workSpace

managerName

Class lerfob.carbonbalancetool.CATDecayFunction extends AbstractMathematicalFunction implements Serializable

Class lerfob.carbonbalancetool.CATExponentialFunction extends CATDecayFunction implements Serializable

Class lerfob.carbonbalancetool.CATFrame extends REpiceaFrame implements Serializable

Serialized Fields

caller

graphicPanel

hwpComboBox

biomassComboBox

file

view

options

sensitivityAnalysisMenuItem

calculateCarbonMenuItem

stopMenuItem

close

help

importMenu

yieldTable

growthSimulation

calculateInCarbon

calculateInCO2

confidenceIntervalSlider

aR2

aR4

aR5

calculateCarbonButton

stopButton

majorProgressBar

majorProgressBarMessage

minorProgressBar

minorProgressBarMessage

vetoEnabled

Class lerfob.carbonbalancetool.CATOptionPanel extends javax.swing.JScrollPane implements Serializable

Serialized Fields

booleanSettings

bySpeciesCheckBox

Class lerfob.carbonbalancetool.CATPanelView.CarbonTabbedPane extends REpiceaTabbedPane implements Serializable

Serialized Fields

exportMenuItem

compareScenarioMenuItem

Class lerfob.carbonbalancetool.CATScenarioComparisonDialog extends REpiceaDialog implements Serializable

Serialized Fields

panelView

alternativeScenarioComboBox

baselineComboBox

comparisonModeComboBox

dateBaselineScenarioComboBox

dateAlternativeScenarioComboBox

ok

cancel

help

selectionCompared

baselinePanel

Class lerfob.carbonbalancetool.CATTask extends AbstractGenericTask implements Serializable

Serialized Fields

currentTask

caller

Class lerfob.carbonbalancetool.CATTask.SetProperRealizationTask extends CATTask implements Serializable

Serialized Fields

realizationID

Class lerfob.carbonbalancetool.CATTimeTable extends java.util.ArrayList<java.lang.Integer> implements Serializable

Serialized Fields

lastStandDate

initialAgeYr

Class lerfob.carbonbalancetool.CATUtility.CarbonToolSettingsVector extends java.util.Vector<E extends CATUtility.ParameterWrapper<?>> implements Serializable

Class lerfob.carbonbalancetool.CATUtilityMaps.CATSpeciesAmountMap extends java.util.HashMap<java.lang.String,AmountMap<CarbonUnit.Element>> implements Serializable

Serialized Fields

speciesList

Class lerfob.carbonbalancetool.CATUtilityMaps.CATUseClassSpeciesAmountMap extends java.util.HashMap<EndUseWoodProductCarbonUnitFeature.UseClass,CATUtilityMaps.CATSpeciesAmountMap> implements Serializable

Serialized Fields

speciesList

Class lerfob.carbonbalancetool.CATUtilityMaps.MonteCarloEstimateMap extends java.util.TreeMap<CarbonUnit.Element,MonteCarloEstimate> implements Serializable

Class lerfob.carbonbalancetool.CATUtilityMaps.SpeciesMonteCarloEstimateMap extends java.util.TreeMap<java.lang.String,CATUtilityMaps.MonteCarloEstimateMap> implements Serializable

Class lerfob.carbonbalancetool.CATUtilityMaps.UseClassSpeciesMonteCarloEstimateMap extends java.util.TreeMap<EndUseWoodProductCarbonUnitFeature.UseClass,CATUtilityMaps.SpeciesMonteCarloEstimateMap> implements Serializable